Difference between revisions of "SJ10664"
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(Created page with "Category:gene == Gene SJ21199 == * transcription-direction: ** positive * right-end-position: ** 37737 * left-end-position: ** 36301 * centisome-position: ** 18.452475...") |
(Created page with "Category:gene == Gene SJ20196 == * transcription-direction: ** positive * right-end-position: ** 74977 * left-end-position: ** 67311 * centisome-position: ** 31.855656...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ20196 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 74977 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 67311 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 31.855656 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_sterols_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[GLUTAMIN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[NAD-SYNTH-GLN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[NAD-SYNTH-NH3-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[CITRULBIO-PWY]] | ||
| + | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[GLUTAMINDEG-PWY]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[PWY-7761]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5653]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PYRIDNUCSAL-PWY]] | ||
| + | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PYRIDNUCSYN-PWY]] | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-5381]] | ||
| + | ** '''6''' reactions found over '''11''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=74977}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=67311}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=31.855656 }} |
| − | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_sterols_curated}} |
{{#set: nb reaction associated=3}} | {{#set: nb reaction associated=3}} | ||
| + | {{#set: nb pathway associated=7}} | ||
Revision as of 20:23, 18 December 2020
Contents
Gene SJ20196
- transcription-direction:
- positive
- right-end-position:
- 74977
- left-end-position:
- 67311
- centisome-position:
- 31.855656
Organism(s) associated with this gene
Reaction(s) associated
- GLUTAMIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- NAD-SYNTH-GLN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- NAD-SYNTH-NH3-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- CITRULBIO-PWY
- 7 reactions found over 8 reactions in the full pathway
- GLUTAMINDEG-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-7761
- 3 reactions found over 4 reactions in the full pathway
- PWY-5653
- 3 reactions found over 4 reactions in the full pathway
- PYRIDNUCSAL-PWY
- 4 reactions found over 6 reactions in the full pathway
- PYRIDNUCSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
- PWY-5381
- 6 reactions found over 11 reactions in the full pathway
