Difference between revisions of "SJ10682"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ21660 == * transcription-direction: ** positive * right-end-position: ** 227030 * left-end-position: ** 213067 * centisome-position: ** 18.835367...")
(Created page with "Category:gene == Gene SJ03824 == * transcription-direction: ** negative * right-end-position: ** 84919 * left-end-position: ** 55595 * centisome-position: ** 48.139618...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21660 ==
+
== Gene SJ03824 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 227030
+
** 84919
 
* left-end-position:
 
* left-end-position:
−
** 213067
+
** 55595
 
* centisome-position:
 
* centisome-position:
−
** 18.835367    
+
** 48.139618    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[AICARTRANSFORM-RXN]]
+
* [[2.4.1.223-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[2.4.1.94-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[FPAIF]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-11889]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[IMPCYCLOHYDROLASE-RXN]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11890]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15205]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6123]]
+
* [[PWY-6558]]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''7''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-6124]]
+
* [[PWY-7437]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7234]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=84919}}
−
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=55595}}
−
{{#set: right-end-position=227030}}
+
{{#set: centisome-position=48.139618   }}
−
{{#set: left-end-position=213067}}
 
−
{{#set: centisome-position=18.835367   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=2}}

Revision as of 15:18, 5 January 2021

Gene SJ03824

  • transcription-direction:
    • negative
  • right-end-position:
    • 84919
  • left-end-position:
    • 55595
  • centisome-position:
    • 48.139618

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6558
    • 7 reactions found over 13 reactions in the full pathway
  • PWY-7437
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10682&oldid=68282"