Difference between revisions of "SJ10683"
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(Created page with "Category:gene == Gene SJ11289 == * transcription-direction: ** negative * right-end-position: ** 308047 * left-end-position: ** 305444 * centisome-position: ** 38.98172...") |
(Created page with "Category:gene == Gene SJ08066 == * transcription-direction: ** negative * right-end-position: ** 27668 * left-end-position: ** 7570 * centisome-position: ** 12.943933...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ08066 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 27668 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 7570 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 12.943933 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[4.3.1.17-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-15122]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-15125]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[THREDEHYD-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-5437]] | ||
| + | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-5826]] | ||
| + | ** '''2''' reactions found over '''14''' reactions in the full pathway | ||
| + | * [[ILEUSYN-PWY]] | ||
| + | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[SERDEG-PWY]] | ||
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-3661]] | ||
| + | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-5497]] | ||
| + | ** '''10''' reactions found over '''24''' reactions in the full pathway | ||
| + | * [[PWY66-428]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=27668}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=7570}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=12.943933 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| + | {{#set: nb pathway associated=7}} | ||
Revision as of 13:00, 14 January 2021
Contents
Gene SJ08066
- transcription-direction:
- negative
- right-end-position:
- 27668
- left-end-position:
- 7570
- centisome-position:
- 12.943933
Organism(s) associated with this gene
Reaction(s) associated
- 4.3.1.17-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: annotation
- RXN-15122
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-15125
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- THREDEHYD-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5437
- 1 reactions found over 6 reactions in the full pathway
- PWY-5826
- 2 reactions found over 14 reactions in the full pathway
- ILEUSYN-PWY
- 4 reactions found over 7 reactions in the full pathway
- SERDEG-PWY
- 1 reactions found over 3 reactions in the full pathway
- PWY-3661
- 3 reactions found over 7 reactions in the full pathway
- PWY-5497
- 10 reactions found over 24 reactions in the full pathway
- PWY66-428
- 2 reactions found over 2 reactions in the full pathway
