Difference between revisions of "SJ10780"

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(Created page with "Category:gene == Gene SJ10780 == * transcription-direction: ** negative * right-end-position: ** 79981 * left-end-position: ** 73410 * centisome-position: ** 19.083742...")
(Created page with "Category:gene == Gene SJ06713 == * transcription-direction: ** positive * right-end-position: ** 270295 * left-end-position: ** 260962 * centisome-position: ** 55.28926...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ10780 ==
+
== Gene SJ06713 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 79981
+
** 270295
 
* left-end-position:
 
* left-end-position:
** 73410
+
** 260962
 
* centisome-position:
 
* centisome-position:
** 19.083742    
+
** 55.28926    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[PHOSGLYPHOS-RXN]]
+
* [[R230-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13927]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[P261-PWY]]
* [[PWY66-399]]
+
** '''1''' reactions found over '''7''' reactions in the full pathway
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-6642]]
* [[GLUCONEO-PWY]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
* [[P124-PWY]]
+
{{#set: right-end-position=270295}}
** '''12''' reactions found over '''15''' reactions in the full pathway
+
{{#set: left-end-position=260962}}
* [[CALVIN-PWY]]
+
{{#set: centisome-position=55.28926   }}
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[P185-PWY]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[P122-PWY]]
 
** '''16''' reactions found over '''18''' reactions in the full pathway
 
* [[PWY-5484]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-1042]]
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
* [[GLYCOLYSIS]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[ANAGLYCOLYSIS-PWY]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-7003]]
 
** '''8''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-6901]]
 
** '''10''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6886]]
 
** '''8''' reactions found over '''5''' reactions in the full pathway
 
* [[SUCSYN-PWY]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=79981}}
 
{{#set: left-end-position=73410}}
 
{{#set: centisome-position=19.083742   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=2}}

Revision as of 18:51, 14 January 2021

Gene SJ06713

  • transcription-direction:
    • positive
  • right-end-position:
    • 270295
  • left-end-position:
    • 260962
  • centisome-position:
    • 55.28926

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P261-PWY
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6642
    • 2 reactions found over 3 reactions in the full pathway