Difference between revisions of "SJ10781"

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(Created page with "Category:gene == Gene SJ16475 == * transcription-direction: ** positive * right-end-position: ** 49104 * left-end-position: ** 40372 * centisome-position: ** 14.320985...")
(Created page with "Category:gene == Gene SJ10781 == * transcription-direction: ** positive * right-end-position: ** 87195 * left-end-position: ** 80736 * centisome-position: ** 20.988216...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16475 ==
+
== Gene SJ10781 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 49104
+
** 87195
 
* left-end-position:
 
* left-end-position:
−
** 40372
+
** 80736
 
* centisome-position:
 
* centisome-position:
−
** 14.320985    
+
** 20.988216    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.1.1.8-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[FARNESYLTRANSTRANSFERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[GPPSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[GLYC3PDEHYDROGBIOSYN-RXN]]
+
* [[HEMEOSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9003]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9384]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-5180]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6118]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-7492]]
−
* [[PWY-7385]]
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6659]]
−
* [[PWY-7411]]
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7517]]
−
* [[PWY-7902]]
+
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6691]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7721]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7736]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5120]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7720]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6383]]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5981]]
+
* [[PWY-7410]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY0-1319]]
+
* [[PWY-7102]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5667]]
+
* [[PWY-6859]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5122]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7141]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7659]]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7709]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5123]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7182]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7856]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7235]]
 +
** '''3''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY3O-19]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5815]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=49104}}
+
{{#set: right-end-position=87195}}
−
{{#set: left-end-position=40372}}
+
{{#set: left-end-position=80736}}
−
{{#set: centisome-position=14.320985   }}
+
{{#set: centisome-position=20.988216   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=22}}

Latest revision as of 11:10, 18 March 2021

Gene SJ10781

  • transcription-direction:
    • positive
  • right-end-position:
    • 87195
  • left-end-position:
    • 80736
  • centisome-position:
    • 20.988216

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7492
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6659
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7517
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6691
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7721
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7736
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5120
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7720
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6383
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7410
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7102
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6859
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5122
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7141
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7659
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-7709
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5123
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7182
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7856
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7235
    • 3 reactions found over n.a reactions in the full pathway
  • PWY3O-19
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5815
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10781&oldid=136266"