Difference between revisions of "SJ10794"

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(Created page with "Category:gene == Gene SJ05276 == * transcription-direction: ** negative * right-end-position: ** 71267 * left-end-position: ** 70398 * centisome-position: ** 74.45978...")
(Created page with "Category:gene == Gene SJ10794 == * transcription-direction: ** positive * right-end-position: ** 314960 * left-end-position: ** 295807 * centisome-position: ** 77.13089...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05276 ==
+
== Gene SJ10794 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 71267
+
** 314960
 
* left-end-position:
 
* left-end-position:
−
** 70398
+
** 295807
 
* centisome-position:
 
* centisome-position:
−
** 74.45978    
+
** 77.13089    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[HOMOCYSMET-RXN]]
−
* [[3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ESTRADIOL-17-BETA-DEHYDROGENASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[HBNOm]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RETINOL-DEHYDROGENASE-RXN]]
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-12730]]
−
* [[RXN-12581]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17728]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY66-368]]
+
* [[PWY-702]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY66-367]]
+
* [[PWY-5041]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[HSERMETANA-PWY]]
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[HOMOSER-METSYN-PWY]]
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY66-380]]
+
* [[PWY-6151]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6872]]
+
* [[PWY-6936]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7782]]
+
{{#set: transcription-direction=positive}}
−
** '''11''' reactions found over '''16''' reactions in the full pathway
+
{{#set: right-end-position=314960}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=295807}}
−
{{#set: right-end-position=71267}}
+
{{#set: centisome-position=77.13089   }}
−
{{#set: left-end-position=70398}}
 
−
{{#set: centisome-position=74.45978   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:07, 18 March 2021

Gene SJ10794

  • transcription-direction:
    • positive
  • right-end-position:
    • 314960
  • left-end-position:
    • 295807
  • centisome-position:
    • 77.13089

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-702
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5041
    • 3 reactions found over 3 reactions in the full pathway
  • HSERMETANA-PWY
    • 3 reactions found over 2 reactions in the full pathway
  • HOMOSER-METSYN-PWY
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6151
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6936
    • 5 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10794&oldid=135012"