Difference between revisions of "SJ10813"
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(Created page with "Category:gene == Gene SJ00533 == * transcription-direction: ** positive * right-end-position: ** 152547 * left-end-position: ** 151945 * centisome-position: ** 91.54637...") |
(Created page with "Category:gene == Gene SJ04795 == * transcription-direction: ** negative * right-end-position: ** 40827 * left-end-position: ** 32432 * centisome-position: ** 6.418162...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ04795 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 40827 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 32432 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 6.418162 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[IDS1]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[IDS2]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[ISPH2-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
| − | {{#set: right-end-position= | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: left-end-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: centisome-position= | + | * [[RXN0-884]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[NONMEVIPP-PWY]] | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7560]] | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=40827}} | ||
| + | {{#set: left-end-position=32432}} | ||
| + | {{#set: centisome-position=6.418162 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| + | {{#set: nb pathway associated=2}} | ||
Revision as of 12:59, 14 January 2021
Contents
Gene SJ04795
- transcription-direction:
- negative
- right-end-position:
- 40827
- left-end-position:
- 32432
- centisome-position:
- 6.418162
Organism(s) associated with this gene
Reaction(s) associated
- IDS1
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- IDS2
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- ISPH2-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN0-884
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- NONMEVIPP-PWY
- 9 reactions found over 9 reactions in the full pathway
- PWY-7560
- 9 reactions found over 9 reactions in the full pathway
