Difference between revisions of "SJ10955"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ14191 == * transcription-direction: ** positive * right-end-position: ** 273437 * left-end-position: ** 242565 * centisome-position: ** 74.9092...")
(Created page with "Category:gene == Gene SJ10955 == * transcription-direction: ** positive * right-end-position: ** 259985 * left-end-position: ** 236970 * centisome-position: ** 16.405224...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14191 ==
+
== Gene SJ10955 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 273437
+
** 259985
 
* left-end-position:
 
* left-end-position:
−
** 242565
+
** 236970
 
* centisome-position:
 
* centisome-position:
−
** 74.9092    
+
** 16.405224    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.1.1.39-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[RXN-15122]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[MALIC-NADP-RXN]]
+
* [[RXN0-2381]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-2382]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[OXALODECARB-RXN]]
+
* [[THREDEHYD-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[TRYPSYN-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5437]]
−
* [[PWY-7118]]
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-5826]]
−
* [[GLUCONEO-PWY]]
+
** '''2''' reactions found over '''14''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[ILEUSYN-PWY]]
−
* [[PWY-7115]]
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-6949]]
−
* [[PWY-7686]]
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
* [[TRPSYN-PWY]]
−
* [[PWY-3641]]
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY66-428]]
−
* [[PWY-7384]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7117]]
 
−
** '''10''' reactions found over '''14''' reactions in the full pathway
 
−
* [[PWY-241]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P184-PWY]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6339]]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[METHYLGALLATE-DEGRADATION-PWY]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=273437}}
+
{{#set: right-end-position=259985}}
−
{{#set: left-end-position=242565}}
+
{{#set: left-end-position=236970}}
−
{{#set: centisome-position=74.9092   }}
+
{{#set: centisome-position=16.405224   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:03, 18 March 2021

Gene SJ10955

  • transcription-direction:
    • positive
  • right-end-position:
    • 259985
  • left-end-position:
    • 236970
  • centisome-position:
    • 16.405224

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5437
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5826
    • 2 reactions found over 14 reactions in the full pathway
  • ILEUSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6949
    • 1 reactions found over 6 reactions in the full pathway
  • TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY66-428
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10955&oldid=132742"