Difference between revisions of "SJ10955"
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(Created page with "Category:gene == Gene SJ17906 == * transcription-direction: ** negative * right-end-position: ** 22454 * left-end-position: ** 8832 * centisome-position: ** 3.4722579...") |
(Created page with "Category:gene == Gene SJ10955 == * transcription-direction: ** positive * right-end-position: ** 259985 * left-end-position: ** 236970 * centisome-position: ** 16.405224...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ10955 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 259985 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 236970 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 16.405224 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| + | * [[RXN-15122]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN0-2381]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN0-2382]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[THREDEHYD-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[TRYPSYN-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5437]] |
| − | ** '''7''' reactions found over ''' | + | ** '''1''' reactions found over '''6''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-5826]] |
| − | {{#set: right-end-position= | + | ** '''2''' reactions found over '''14''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[ILEUSYN-PWY]] |
| − | {{#set: centisome-position= | + | ** '''4''' reactions found over '''7''' reactions in the full pathway |
| + | * [[PWY-6949]] | ||
| + | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[TRPSYN-PWY]] | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY66-428]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=259985}} | ||
| + | {{#set: left-end-position=236970}} | ||
| + | {{#set: centisome-position=16.405224 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Latest revision as of 11:03, 18 March 2021
Contents
Gene SJ10955
- transcription-direction:
- positive
- right-end-position:
- 259985
- left-end-position:
- 236970
- centisome-position:
- 16.405224
Organism(s) associated with this gene
Reaction(s) associated
- RXN-15122
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN0-2381
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN0-2382
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- THREDEHYD-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- TRYPSYN-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-5437
- 1 reactions found over 6 reactions in the full pathway
- PWY-5826
- 2 reactions found over 14 reactions in the full pathway
- ILEUSYN-PWY
- 4 reactions found over 7 reactions in the full pathway
- PWY-6949
- 1 reactions found over 6 reactions in the full pathway
- TRPSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
- PWY66-428
- 2 reactions found over 2 reactions in the full pathway
