Difference between revisions of "SJ10996"
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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-380 CPD-380] == * common-name: ** 3-sulfopyruvate * smiles: ** c(=o)([o-])c(=o)cs(=o)(=o)[o...") |
(Created page with "Category:gene == Gene SJ10996 == * transcription-direction: ** negative * right-end-position: ** 1086183 * left-end-position: ** 1080311 * centisome-position: ** 74.78897...") |
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| − | [[Category: | + | [[Category:gene]] |
| − | == | + | == Gene SJ10996 == |
| − | * | + | * transcription-direction: |
| − | ** | + | ** negative |
| − | * | + | * right-end-position: |
| − | ** | + | ** 1086183 |
| − | * | + | * left-end-position: |
| − | ** | + | ** 1080311 |
| − | * | + | * centisome-position: |
| − | ** | + | ** 74.78897 |
| − | == | + | == Organism(s) associated with this gene == |
| − | * [[ | + | * [[S.japonica_carotenoid_curated]] |
| − | * [[ | + | == Reaction(s) associated == |
| − | + | * [[ADDALT-RXN]] | |
| − | * [[ | + | ** Category: [[annotation]] |
| − | * [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | + | ** Category: [[orthology]] | |
| − | {{#set: | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: | + | * [[ADENODEAMIN-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[AMP-DEAMINASE-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7179-1]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-7179]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6611]] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[SALVADEHYPOX-PWY]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-6609]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY0-1296]] | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-6596]] | ||
| + | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=1086183}} | ||
| + | {{#set: left-end-position=1080311}} | ||
| + | {{#set: centisome-position=74.78897 }} | ||
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| + | {{#set: nb reaction associated=3}} | ||
| + | {{#set: nb pathway associated=7}} | ||
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ10996
- transcription-direction:
- negative
- right-end-position:
- 1086183
- left-end-position:
- 1080311
- centisome-position:
- 74.78897
Organism(s) associated with this gene
Reaction(s) associated
- ADDALT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- ADENODEAMIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- AMP-DEAMINASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-7179-1
- 3 reactions found over 3 reactions in the full pathway
- PWY-7179
- 4 reactions found over 4 reactions in the full pathway
- PWY-6611
- 2 reactions found over 3 reactions in the full pathway
- SALVADEHYPOX-PWY
- 5 reactions found over 5 reactions in the full pathway
- PWY-6609
- 4 reactions found over 4 reactions in the full pathway
- PWY0-1296
- 6 reactions found over 6 reactions in the full pathway
- PWY-6596
- 7 reactions found over 8 reactions in the full pathway
