Difference between revisions of "SJ10996"

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(Created page with "Category:gene == Gene SJ21389 == * transcription-direction: ** positive * right-end-position: ** 75058 * left-end-position: ** 64341 * centisome-position: ** 33.183937...")
(Created page with "Category:gene == Gene SJ10996 == * transcription-direction: ** negative * right-end-position: ** 1086183 * left-end-position: ** 1080311 * centisome-position: ** 74.78897...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21389 ==
+
== Gene SJ10996 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 75058
+
** 1086183
 
* left-end-position:
 
* left-end-position:
−
** 64341
+
** 1080311
 
* centisome-position:
 
* centisome-position:
−
** 33.183937    
+
** 74.78897    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[ADDALT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-11277]]
+
* [[ADENODEAMIN-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16030]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16121]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17730]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[AMP-DEAMINASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[TRIGLSYN-PWY]]
+
* [[PWY-7179-1]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7039]]
+
* [[PWY-7179]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6453]]
+
* [[PWY-6611]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7782]]
+
* [[SALVADEHYPOX-PWY]]
−
** '''11''' reactions found over '''16''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6609]]
−
{{#set: right-end-position=75058}}
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=64341}}
+
* [[PWY0-1296]]
−
{{#set: centisome-position=33.183937   }}
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6596]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=1086183}}
 +
{{#set: left-end-position=1080311}}
 +
{{#set: centisome-position=74.78897   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:04, 18 March 2021

Gene SJ10996

  • transcription-direction:
    • negative
  • right-end-position:
    • 1086183
  • left-end-position:
    • 1080311
  • centisome-position:
    • 74.78897

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7179-1
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7179
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6611
    • 2 reactions found over 3 reactions in the full pathway
  • SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6609
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1296
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6596
    • 7 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10996&oldid=133245"