Difference between revisions of "SJ11003"

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(Created page with "Category:gene == Gene SJ10034 == * transcription-direction: ** positive * right-end-position: ** 327397 * left-end-position: ** 311304 * centisome-position: ** 38.30868...")
(Created page with "Category:gene == Gene SJ11003 == * transcription-direction: ** negative * right-end-position: ** 1139626 * left-end-position: ** 1132730 * centisome-position: ** 78.41790...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ10034 ==
+
== Gene SJ11003 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 327397
+
** 1139626
 
* left-end-position:
 
* left-end-position:
** 311304
+
** 1132730
 
* centisome-position:
 
* centisome-position:
** 38.30868    
+
** 78.41790    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[METHIONINE--TRNA-LIGASE-RXN]]
+
* [[RXN-16291]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[RXN-16292]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
* [[RXN-16165]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16293]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16294]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16991]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[TRNA-CHARGING-PWY]]
+
* [[PWY-7706]]
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''4''' reactions found over '''13''' reactions in the full pathway
{{#set: transcription-direction=positive}}
+
{{#set: transcription-direction=negative}}
{{#set: right-end-position=327397}}
+
{{#set: right-end-position=1139626}}
{{#set: left-end-position=311304}}
+
{{#set: left-end-position=1132730}}
{{#set: centisome-position=38.30868   }}
+
{{#set: centisome-position=78.41790   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}

Latest revision as of 11:04, 18 March 2021

Gene SJ11003

  • transcription-direction:
    • negative
  • right-end-position:
    • 1139626
  • left-end-position:
    • 1132730
  • centisome-position:
    • 78.41790

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7706
    • 4 reactions found over 13 reactions in the full pathway