Difference between revisions of "SJ11017"

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(Created page with "Category:gene == Gene SJ06991 == * transcription-direction: ** positive * right-end-position: ** 123363 * left-end-position: ** 82945 * centisome-position: ** 17.77906...")
(Created page with "Category:gene == Gene SJ17269 == * transcription-direction: ** negative * right-end-position: ** 151007 * left-end-position: ** 148252 * centisome-position: ** 55.673973...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ06991 ==
+
== Gene SJ17269 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 123363
+
** 151007
 
* left-end-position:
 
* left-end-position:
** 82945
+
** 148252
 
* centisome-position:
 
* centisome-position:
** 17.77906    
+
** 55.673973    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.5.2.17-RXN]]
* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12195]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15561]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-6545]]
+
* [[PWY-5691]]
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
* [[PWY-7210]]
+
* [[PWY-7394]]
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PWY-7198]]
+
* [[PWY-7849]]
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PWY-7184]]
+
{{#set: transcription-direction=negative}}
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=151007}}
* [[PWY-7511]]
+
{{#set: left-end-position=148252}}
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=55.673973   }}
{{#set: transcription-direction=positive}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: right-end-position=123363}}
+
{{#set: nb reaction associated=1}}
{{#set: left-end-position=82945}}
+
{{#set: nb pathway associated=3}}
{{#set: centisome-position=17.77906   }}
 
{{#set: organism associated=S.japonica_sterols_curated}}
 
{{#set: nb reaction associated=7}}
 
{{#set: nb pathway associated=5}}
 

Revision as of 14:49, 5 January 2021

Gene SJ17269

  • transcription-direction:
    • negative
  • right-end-position:
    • 151007
  • left-end-position:
    • 148252
  • centisome-position:
    • 55.673973

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5691
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7394
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7849
    • 2 reactions found over 3 reactions in the full pathway