Difference between revisions of "SJ11025"

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(Created page with "Category:gene == Gene SJ10781 == * transcription-direction: ** positive * right-end-position: ** 87195 * left-end-position: ** 80736 * centisome-position: ** 20.988216...")
(Created page with "Category:gene == Gene SJ11025 == * transcription-direction: ** negative * right-end-position: ** 173826 * left-end-position: ** 169449 * centisome-position: ** 21.573357...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10781 ==
+
== Gene SJ11025 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 87195
+
** 173826
 
* left-end-position:
 
* left-end-position:
−
** 80736
+
** 169449
 
* centisome-position:
 
* centisome-position:
−
** 20.988216    
+
** 21.573357    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[UGD-RXN]]
−
* [[FARNESYLTRANSTRANSFERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GPPSYN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[HEMEOSYN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9003]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-9384]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5180]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7346]]
−
* [[PWY-7492]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6659]]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7517]]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6691]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7721]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7736]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5120]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7720]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6383]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7410]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7102]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6859]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5122]]
 
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7141]]
+
* [[PWY-7820]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7659]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=173826}}
−
* [[PWY-7709]]
+
{{#set: left-end-position=169449}}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: centisome-position=21.573357   }}
−
* [[PWY-5123]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7182]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7856]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7235]]
 
−
** '''3''' reactions found over '''n.a''' reactions in the full pathway
 
−
* [[PWY3O-19]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5815]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=87195}}
 
−
{{#set: left-end-position=80736}}
 
−
{{#set: centisome-position=20.988216   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=22}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:10, 18 March 2021

Gene SJ11025

  • transcription-direction:
    • negative
  • right-end-position:
    • 173826
  • left-end-position:
    • 169449
  • centisome-position:
    • 21.573357

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7346
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7820
    • 2 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11025&oldid=136306"