Difference between revisions of "SJ11025"
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(Created page with "Category:gene == Gene SJ15668 == * transcription-direction: ** negative * right-end-position: ** 259410 * left-end-position: ** 196865 * centisome-position: ** 67.219246...") |
(Created page with "Category:gene == Gene SJ07743 == * transcription-direction: ** positive * right-end-position: ** 812751 * left-end-position: ** 805273 * centisome-position: ** 90.998604...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ07743 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 812751 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 805273 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 90.998604 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RIB5PISOM-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| − | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[P124-PWY]] |
| − | ** '''5''' reactions found over ''' | + | ** '''12''' reactions found over '''15''' reactions in the full pathway |
| − | * [[PWY- | + | * [[P185-PWY]] |
| − | ** ''' | + | ** '''11''' reactions found over '''12''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[NONOXIPENT-PWY]] |
| − | {{#set: right-end-position= | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-5723]] |
| − | {{#set: centisome-position= | + | ** '''10''' reactions found over '''10''' reactions in the full pathway |
| + | * [[CALVIN-PWY]] | ||
| + | ** '''12''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[PWY-1861]] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=812751}} | ||
| + | {{#set: left-end-position=805273}} | ||
| + | {{#set: centisome-position=90.998604 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Revision as of 09:27, 27 August 2019
Contents
Gene SJ07743
- transcription-direction:
- positive
- right-end-position:
- 812751
- left-end-position:
- 805273
- centisome-position:
- 90.998604
Organism(s) associated with this gene
Reaction(s) associated
- RIB5PISOM-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- P124-PWY
- 12 reactions found over 15 reactions in the full pathway
- P185-PWY
- 11 reactions found over 12 reactions in the full pathway
- NONOXIPENT-PWY
- 5 reactions found over 5 reactions in the full pathway
- PWY-5723
- 10 reactions found over 10 reactions in the full pathway
- CALVIN-PWY
- 12 reactions found over 13 reactions in the full pathway
- PWY-1861
- 7 reactions found over 9 reactions in the full pathway
