Difference between revisions of "SJ11065"

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(Created page with "Category:gene == Gene SJ18954 == * transcription-direction: ** positive * right-end-position: ** 218498 * left-end-position: ** 199765 * centisome-position: ** 31.189257...")
(Created page with "Category:gene == Gene SJ11065 == * transcription-direction: ** negative * right-end-position: ** 180576 * left-end-position: ** 159146 * centisome-position: ** 41.83176...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18954 ==
+
== Gene SJ11065 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 218498
+
** 180576
 
* left-end-position:
 
* left-end-position:
−
** 199765
+
** 159146
 
* centisome-position:
 
* centisome-position:
−
** 31.189257    
+
** 41.83176    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[6.3.5.6-RXN]]
+
* [[ATPASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ASPARAGINE--TRNA-LIGASE-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY490-4]]
+
* [[PWY-6545]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[TRNA-CHARGING-PWY]]
+
* [[PWY-7210]]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7198]]
−
{{#set: right-end-position=218498}}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: left-end-position=199765}}
+
* [[PWY-7184]]
−
{{#set: centisome-position=31.189257   }}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=180576}}
 +
{{#set: left-end-position=159146}}
 +
{{#set: centisome-position=41.83176   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:05, 18 March 2021

Gene SJ11065

  • transcription-direction:
    • negative
  • right-end-position:
    • 180576
  • left-end-position:
    • 159146
  • centisome-position:
    • 41.83176

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11065&oldid=134164"