Difference between revisions of "SJ11088"

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(Created page with "Category:gene == Gene SJ20603 == * transcription-direction: ** negative * right-end-position: ** 145147 * left-end-position: ** 128236 * centisome-position: ** 62.402855...")
(Created page with "Category:gene == Gene SJ11088 == * transcription-direction: ** negative * right-end-position: ** 136042 * left-end-position: ** 128302 * centisome-position: ** 33.726673...")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20603 ==
+
== Gene SJ11088 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 145147
+
** 136042
 
* left-end-position:
 
* left-end-position:
−
** 128236
+
** 128302
 
* centisome-position:
 
* centisome-position:
−
** 62.402855    
+
** 33.726673    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15556]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
* [[ALKAPHOSPHA-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-5822]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8748]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7511]]
+
* [[NADPHOS-DEPHOS-PWY]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5083]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[NAD-BIOSYNTHESIS-II]]
 +
** '''4''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5491]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=145147}}
+
{{#set: right-end-position=136042}}
−
{{#set: left-end-position=128236}}
+
{{#set: left-end-position=128302}}
−
{{#set: centisome-position=62.402855   }}
+
{{#set: centisome-position=33.726673   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:06, 18 March 2021

Gene SJ11088

  • transcription-direction:
    • negative
  • right-end-position:
    • 136042
  • left-end-position:
    • 128302
  • centisome-position:
    • 33.726673

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-5491
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11088&oldid=134189"