Difference between revisions of "SJ11114"

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(Created page with "Category:gene == Gene SJ22334 == * transcription-direction: ** positive * right-end-position: ** 111189 * left-end-position: ** 93285 * centisome-position: ** 52.413486...")
(Created page with "Category:gene == Gene SJ1973 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-7978 ** Category: [...")
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[[Category:gene]]
 
[[Category:gene]]
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== Gene SJ22334 ==
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== Gene SJ1973 ==
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* transcription-direction:
 
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** positive
 
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* right-end-position:
 
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** 111189
 
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* left-end-position:
 
−
** 93285
 
−
* centisome-position:
 
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** 52.413486   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
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* [[AN2PT]]
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* [[RXN-7978]]
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** Category: [[orthology]]
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** Category: [[manual]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
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* [[NAD-KIN-RXN]]
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* [[RXN-7979]]
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** Category: [[annotation]]
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** Category: [[manual]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
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* [[NADPHOS-DEPHOS-PWY-1]]
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* [[PWY-5945]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7269]]
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* [[PWY-5174]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7268]]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[NADPHOS-DEPHOS-PWY]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-5083]]
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=111189}}
 
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{{#set: left-end-position=93285}}
 
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{{#set: centisome-position=52.413486    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=5}}
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{{#set: nb pathway associated=2}}

Revision as of 09:25, 27 August 2019

Gene SJ1973

Organism(s) associated with this gene

Reaction(s) associated

  • RXN-7978
    • Category: manual
      • source: sjap; tool: unknown-tool; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
  • RXN-7979
    • Category: manual
      • source: sjap; tool: unknown-tool; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)

Pathway(s) associated

  • PWY-5945
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5174
    • 1 reactions found over 3 reactions in the full pathway


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