Difference between revisions of "SJ11114"

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(Created page with "Category:gene == Gene SJ09945 == * transcription-direction: ** positive * right-end-position: ** 244797 * left-end-position: ** 217669 * centisome-position: ** 54.161472...")
(Created page with "Category:gene == Gene SJ22198 == * transcription-direction: ** negative * right-end-position: ** 132254 * left-end-position: ** 112917 * centisome-position: ** 62.900448...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09945 ==
+
== Gene SJ22198 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 244797
+
** 132254
 
* left-end-position:
 
* left-end-position:
−
** 217669
+
** 112917
 
* centisome-position:
 
* centisome-position:
−
** 54.161472    
+
** 62.900448    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN]]
−
* [[2.5.1.41-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[CYCLOARTENOL-SYNTHASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[FPPSYN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GPPSYN-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[LANOSTEROL-SYNTHASE-RXN]]
+
* [[RXN66-579]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7810]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7811]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7813]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-4661]]
−
* [[PWY-6349]]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-6372]]
−
* [[PWY-6115]]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
** '''1''' reactions found over '''n.a''' reactions in the full pathway
+
* [[PWY-2301]]
−
* [[PWY-7154]]
 
−
** '''2''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7155]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6098]]
 
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-2541]]
+
* [[PWY-6664]]
−
** '''11''' reactions found over '''35''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6109]]
+
* [[PWY-6580]]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6859]]
+
* [[PWY1G-0]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7736]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7102]]
 
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7721]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=132254}}
−
* [[PWY-5123]]
+
{{#set: left-end-position=112917}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=62.900448   }}
−
* [[PWY-6383]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
{{#set: nb reaction associated=2}}
−
* [[PWY-7410]]
+
{{#set: nb pathway associated=6}}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5122]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7141]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7659]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7709]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7182]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6132]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5808]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5132]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5133]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=244797}}
 
−
{{#set: left-end-position=217669}}
 
−
{{#set: centisome-position=54.161472   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=8}}
 
−
{{#set: nb pathway associated=23}}
 

Revision as of 14:47, 5 January 2021

Gene SJ22198

  • transcription-direction:
    • negative
  • right-end-position:
    • 132254
  • left-end-position:
    • 112917
  • centisome-position:
    • 62.900448

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4661
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6372
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-2301
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6664
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6580
    • 2 reactions found over 3 reactions in the full pathway
  • PWY1G-0
    • 3 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11114&oldid=55538"