Difference between revisions of "SJ11148"

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(Created page with "Category:gene == Gene SJ06695 == * transcription-direction: ** positive * right-end-position: ** 124101 * left-end-position: ** 96129 * centisome-position: ** 10.34229...")
(Created page with "Category:gene == Gene SJ10799 == * transcription-direction: ** negative * right-end-position: ** 74280 * left-end-position: ** 64265 * centisome-position: ** 16.756927...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06695 ==
+
== Gene SJ10799 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 124101
+
** 74280
 
* left-end-position:
 
* left-end-position:
−
** 96129
+
** 64265
 
* centisome-position:
 
* centisome-position:
−
** 10.34229    
+
** 16.756927    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
* [[METHENYLTHFCYCLOHYDRO-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
{{#set: transcription-direction=positive}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: right-end-position=124101}}
+
== Pathway(s) associated ==
−
{{#set: left-end-position=96129}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: centisome-position=10.34229   }}
+
* [[1CMET2-PWY]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5497]]
 +
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
* [[P164-PWY]]
 +
** '''6''' reactions found over '''17''' reactions in the full pathway
 +
* [[CODH-PWY]]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5030]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7909]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3841]]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-2201]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6613]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-1722]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=74280}}
 +
{{#set: left-end-position=64265}}
 +
{{#set: centisome-position=16.756927   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=10}}

Revision as of 11:10, 15 January 2021

Gene SJ10799

  • transcription-direction:
    • negative
  • right-end-position:
    • 74280
  • left-end-position:
    • 64265
  • centisome-position:
    • 16.756927

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • 1CMET2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 17 reactions in the full pathway
  • CODH-PWY
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-5030
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7909
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-2201
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-6613
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-1722
    • 3 reactions found over 3 reactions in the full pathway




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