Difference between revisions of "SJ11166"

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(Created page with "Category:gene == Gene SJ05715 == * transcription-direction: ** negative * right-end-position: ** 41664 * left-end-position: ** 36946 * centisome-position: ** 41.4667 =...")
(Created page with "Category:gene == Gene SJ11166 == * transcription-direction: ** positive * right-end-position: ** 12790 * left-end-position: ** 3929 * centisome-position: ** 17.004242...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ05715 ==
+
== Gene SJ11166 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 41664
+
** 12790
 
* left-end-position:
 
* left-end-position:
** 36946
+
** 3929
 
* centisome-position:
 
* centisome-position:
** 41.4667    
+
** 17.004242    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[NADH-DEHYDROG-A-RXN]]
+
* [[RIBOFLAVIN-SYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[NADH-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5330]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RIBOSYN2-PWY]]
* [[PWY0-1335]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-6167]]
* [[PWY-4302]]
+
** '''5''' reactions found over '''10''' reactions in the full pathway
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-6168]]
* [[PWY-3781]]
+
** '''7''' reactions found over '''9''' reactions in the full pathway
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
* [[PWY0-1334]]
+
{{#set: right-end-position=12790}}
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: left-end-position=3929}}
* [[PWY-6692]]
+
{{#set: centisome-position=17.004242   }}
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5083]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7279]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY0-1573]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7269]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY0-1568]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY0-1567]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=41664}}
 
{{#set: left-end-position=36946}}
 
{{#set: centisome-position=41.4667   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:10, 18 March 2021

Gene SJ11166

  • transcription-direction:
    • positive
  • right-end-position:
    • 12790
  • left-end-position:
    • 3929
  • centisome-position:
    • 17.004242

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6167
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6168
    • 7 reactions found over 9 reactions in the full pathway