Difference between revisions of "SJ11169"

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(Created page with "Category:gene == Gene SJ08066 == * transcription-direction: ** negative * right-end-position: ** 27668 * left-end-position: ** 7570 * centisome-position: ** 12.943933...")
 
(Created page with "Category:gene == Gene SJ11169 == * transcription-direction: ** negative * right-end-position: ** 152638 * left-end-position: ** 149960 * centisome-position: ** 39.695583...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08066 ==
+
== Gene SJ11169 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 27668
+
** 152638
 
* left-end-position:
 
* left-end-position:
−
** 7570
+
** 149960
 
* centisome-position:
 
* centisome-position:
−
** 12.943933    
+
** 39.695583    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4.3.1.17-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ENOYL-COA-DELTA-ISOM-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15122]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12519]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15125]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[THREDEHYD-RXN]]
+
* [[RXN-13721]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-6384]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7836]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7931]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[ILEUSYN-PWY]]
+
* [[VALDEG-PWY]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5437]]
+
* [[PWY-5137]]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5826]]
+
* [[FAO-PWY]]
−
** '''2''' reactions found over '''14''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[SERDEG-PWY]]
+
* [[PWY-6837]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5497]]
+
* [[PWY-3941]]
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-3661]]
+
* [[PWY-7574]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY66-428]]
+
* [[PWY-5138]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7291]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=27668}}
+
{{#set: right-end-position=152638}}
−
{{#set: left-end-position=7570}}
+
{{#set: left-end-position=149960}}
−
{{#set: centisome-position=12.943933   }}
+
{{#set: centisome-position=39.695583   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=8}}

Latest revision as of 11:06, 18 March 2021

Gene SJ11169

  • transcription-direction:
    • negative
  • right-end-position:
    • 152638
  • left-end-position:
    • 149960
  • centisome-position:
    • 39.695583

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • VALDEG-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-5137
    • 1 reactions found over 1 reactions in the full pathway
  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6837
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-3941
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7574
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-5138
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7291
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11169&oldid=134208"