Difference between revisions of "SJ11187"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ALPHA-ALANINE L-ALPHA-ALANINE] == * common-name: ** l-alanine * smiles: ** cc([n+])c([o-])=o...")
(Created page with "Category:gene == Gene SJ15069 == * transcription-direction: ** positive * right-end-position: ** 168145 * left-end-position: ** 156447 * centisome-position: ** 51.66268...")
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ALPHA-ALANINE L-ALPHA-ALANINE] ==
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== Gene SJ15069 ==
* common-name:
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* transcription-direction:
** l-alanine
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** positive
* smiles:
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* right-end-position:
** cc([n+])c([o-])=o
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** 168145
* inchi-key:
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* left-end-position:
** qnaybmklocpygj-reohclbhsa-n
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** 156447
* molecular-weight:
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* centisome-position:
** 89.094
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** 51.66268   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[7KAPSYN-RXN]]
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* [[S.japonica_sterols_curated]]
* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
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== Reaction(s) associated ==
* [[ALANINE--OXO-ACID-AMINOTRANSFERASE-RXN]]
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* [[MANNPISOM-RXN]]
* [[ALANINE--TRNA-LIGASE-RXN]]
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** Category: [[annotation]]
* [[ALANINE-AMINOTRANSFERASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ALANINE-DEHYDROGENASE-RXN]]
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** Category: [[orthology]]
* [[RXN-13698]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* [[RXN-9787]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
* [[biomass_rxn]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
== Reaction(s) known to produce the compound ==
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== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-3861]]
* [[3.4.11.2-RXN]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
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* [[PWY-5659]]
* [[ALANINE--OXO-ACID-AMINOTRANSFERASE-RXN]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
* [[ALANINE-AMINOTRANSFERASE-RXN]]
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* [[PWY-7586]]
* [[ALANINE-DEHYDROGENASE-RXN]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
* [[RXN-12588]]
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* [[PWY-7456]]
* [[RXN-13698]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
* [[RXN-14385]]
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* [[PWY-6992]]
* [[RXN-15881]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
* [[RXN-8351]]
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* [[PWY-882]]
* [[RXN-9787]]
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** '''6''' reactions found over '''8''' reactions in the full pathway
* [[RXN0-308]]
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* [[PWY-3881]]
* [[RXN0-6975]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
* [[RXN0-6976]]
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* [[MANNCAT-PWY]]
* [[RXN0-6977]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
* [[RXN0-6978]]
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{{#set: transcription-direction=positive}}
* [[RXN0-6979]]
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{{#set: right-end-position=168145}}
* [[RXN0-6980]]
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{{#set: left-end-position=156447}}
* [[RXN0-6981]]
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{{#set: centisome-position=51.66268    }}
* [[RXN0-6985]]
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{{#set: organism associated=S.japonica_sterols_curated}}
* [[SELENOCYSTEINE-LYASE-RXN]]
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{{#set: nb reaction associated=1}}
</div>
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{{#set: nb pathway associated=8}}
== Reaction(s) of unknown directionality ==
 
{{#set: common-name=l-alanine}}
 
{{#set: inchi-key=inchikey=qnaybmklocpygj-reohclbhsa-n}}
 
{{#set: molecular-weight=89.094}}
 

Revision as of 20:21, 18 December 2020

Gene SJ15069

  • transcription-direction:
    • positive
  • right-end-position:
    • 168145
  • left-end-position:
    • 156447
  • centisome-position:
    • 51.66268

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-3861
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5659
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7586
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7456
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6992
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-882
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-3881
    • 2 reactions found over 3 reactions in the full pathway
  • MANNCAT-PWY
    • 1 reactions found over 1 reactions in the full pathway