Difference between revisions of "SJ11196"

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(Created page with "Category:gene == Gene SJ20193 == * transcription-direction: ** negative * right-end-position: ** 202379 * left-end-position: ** 190309 * centisome-position: ** 90.06578...")
(Created page with "Category:gene == Gene SJ09863 == * transcription-direction: ** positive * right-end-position: ** 131106 * left-end-position: ** 120838 * centisome-position: ** 29.857555...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ20193 ==
+
== Gene SJ09863 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 202379
+
** 131106
 
* left-end-position:
 
* left-end-position:
** 190309
+
** 120838
 
* centisome-position:
 
* centisome-position:
** 90.06578    
+
** 29.857555    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ATPASE-RXN]]
+
* [[2.7.11.18-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 21: Line 18:
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-12195]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=positive}}
* [[RXN-12196]]
+
{{#set: right-end-position=131106}}
** Category: [[annotation]]
+
{{#set: left-end-position=120838}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=29.857555   }}
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7210]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=202379}}
 
{{#set: left-end-position=190309}}
 
{{#set: centisome-position=90.06578   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=4}}
 

Revision as of 11:06, 15 January 2021

Gene SJ09863

  • transcription-direction:
    • positive
  • right-end-position:
    • 131106
  • left-end-position:
    • 120838
  • centisome-position:
    • 29.857555

Organism(s) associated with this gene

Reaction(s) associated