Difference between revisions of "SJ11229"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18733 CPD-18733] == * common-name: ** 4-hydroxy-2-methyl-3-oxo-4-farnesyl-3,4-dihydroquinol...")
(Created page with "Category:gene == Gene SJ17628 == * transcription-direction: ** positive * right-end-position: ** 603895 * left-end-position: ** 577401 * centisome-position: ** 50.191933...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18733 CPD-18733] ==
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== Gene SJ17628 ==
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* common-name:
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* transcription-direction:
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** 4-hydroxy-2-methyl-3-oxo-4-farnesyl-3,4-dihydroquinoline-1-oxide
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** positive
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* smiles:
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* right-end-position:
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** cc(c)=cccc(c)=cccc(c)=ccc2(o)(c1(c=cc=cc=1[n+](=c(c)c(=o)2)[o-]))
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** 603895
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* inchi-key:
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* left-end-position:
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** rnxnmmdmlfjckp-yefhwucqsa-n
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** 577401
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* molecular-weight:
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* centisome-position:
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** 395.541
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** 50.191933   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_sterols_curated]]
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* [[RXN-17334]]
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== Reaction(s) associated ==
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* [[RXN-17335]]
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* [[ANTHRANSYN-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=4-hydroxy-2-methyl-3-oxo-4-farnesyl-3,4-dihydroquinoline-1-oxide}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=rnxnmmdmlfjckp-yefhwucqsa-n}}
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** Category: [[orthology]]
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{{#set: molecular-weight=395.541}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-5958]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[TRPSYN-PWY]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6661]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6660]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=603895}}
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{{#set: left-end-position=577401}}
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{{#set: centisome-position=50.191933    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=4}}

Revision as of 20:22, 18 December 2020

Gene SJ17628

  • transcription-direction:
    • positive
  • right-end-position:
    • 603895
  • left-end-position:
    • 577401
  • centisome-position:
    • 50.191933

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5958
    • 1 reactions found over 4 reactions in the full pathway
  • TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6661
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6660
    • 1 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11229&oldid=42113"