Difference between revisions of "SJ11253"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ09285 == * transcription-direction: ** positive * right-end-position: ** 299387 * left-end-position: ** 297649 * centisome-position: ** 70.76200...")
(Created page with "Category:gene == Gene SJ19151 == * transcription-direction: ** positive * right-end-position: ** 168940 * left-end-position: ** 166118 * centisome-position: ** 25.963524...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09285 ==
+
== Gene SJ19151 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 299387
+
** 168940
 
* left-end-position:
 
* left-end-position:
−
** 297649
+
** 166118
 
* centisome-position:
 
* centisome-position:
−
** 70.76200    
+
** 25.963524    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[APIGNAR-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ALCOHOL-DEHYDROGENASE-NADP+-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[CHALCONE-ISOMERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-3221]]
+
* [[RETINOL-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-10717]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7647]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-10841]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12484]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12581]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14023]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY1F-FLAVSYN]]
+
* [[PWY-6307]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6787]]
+
* [[PWY-6857]]
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7397]]
+
* [[PWY-6861]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-7897]]
+
* [[PWY-6872]]
−
** '''3''' reactions found over '''15''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-2002]]
+
* [[PWY-7178]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6325]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5059]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=299387}}
+
{{#set: right-end-position=168940}}
−
{{#set: left-end-position=297649}}
+
{{#set: left-end-position=166118}}
−
{{#set: centisome-position=70.76200   }}
+
{{#set: centisome-position=25.963524   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=5}}

Revision as of 15:24, 5 January 2021

Gene SJ19151

  • transcription-direction:
    • positive
  • right-end-position:
    • 168940
  • left-end-position:
    • 166118
  • centisome-position:
    • 25.963524

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6307
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6861
    • 1 reactions found over 12 reactions in the full pathway
  • PWY-6872
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7178
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11253&oldid=71390"