Difference between revisions of "SJ11297"

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(Created page with "Category:gene == Gene SJ19171 == * transcription-direction: ** positive * right-end-position: ** 596840 * left-end-position: ** 581840 * centisome-position: ** 90.93907...")
(Created page with "Category:gene == Gene SJ11297 == * transcription-direction: ** negative * right-end-position: ** 440735 * left-end-position: ** 430484 * centisome-position: ** 54.939716...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19171 ==
+
== Gene SJ11297 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 596840
+
** 440735
 
* left-end-position:
 
* left-end-position:
−
** 581840
+
** 430484
 
* centisome-position:
 
* centisome-position:
−
** 90.93907    
+
** 54.939716    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
** Category: [[orthology]]
−
{{#set: right-end-position=596840}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: left-end-position=581840}}
+
* [[RXN-11754]]
−
{{#set: centisome-position=90.93907   }}
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14177]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9227]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9235]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9242]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN3O-54]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-6708]]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5870]]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5855]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5873]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5857]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5872]]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5871]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5856]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY3O-19]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7230]]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7233]]
 +
** '''3''' reactions found over '''n.a''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=440735}}
 +
{{#set: left-end-position=430484}}
 +
{{#set: centisome-position=54.939716   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=11}}

Latest revision as of 11:06, 18 March 2021

Gene SJ11297

  • transcription-direction:
    • negative
  • right-end-position:
    • 440735
  • left-end-position:
    • 430484
  • centisome-position:
    • 54.939716

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6708
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5870
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-5855
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5873
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5857
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5872
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-5871
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5856
    • 3 reactions found over 8 reactions in the full pathway
  • PWY3O-19
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7230
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-7233
    • 3 reactions found over n.a reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11297&oldid=134559"