Difference between revisions of "SJ11297"

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(Created page with "Category:gene == Gene SJ15388 == * transcription-direction: ** positive * right-end-position: ** 482236 * left-end-position: ** 467092 * centisome-position: ** 66.27816...")
(Created page with "Category:gene == Gene SJ16356 == * transcription-direction: ** positive * right-end-position: ** 140457 * left-end-position: ** 125574 * centisome-position: ** 44.079613...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15388 ==
+
== Gene SJ16356 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 482236
+
** 140457
 
* left-end-position:
 
* left-end-position:
−
** 467092
+
** 125574
 
* centisome-position:
 
* centisome-position:
−
** 66.27816    
+
** 44.079613    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[TRIOSEPISOMERIZATION-RXN]]
+
* [[GSHTRAN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[GST-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13673]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15680]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6842]]
−
* [[GLUCONEO-PWY]]
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-4061]]
−
* [[CALVIN-PWY]]
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-7112]]
−
* [[P185-PWY]]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-7533]]
−
* [[PWY-5484]]
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[P341-PWY]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY66-373]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=482236}}
+
{{#set: right-end-position=140457}}
−
{{#set: left-end-position=467092}}
+
{{#set: left-end-position=125574}}
−
{{#set: centisome-position=66.27816   }}
+
{{#set: centisome-position=44.079613   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=4}}

Revision as of 15:20, 5 January 2021

Gene SJ16356

  • transcription-direction:
    • positive
  • right-end-position:
    • 140457
  • left-end-position:
    • 125574
  • centisome-position:
    • 44.079613

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




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