Difference between revisions of "SJ11348"

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(Created page with "Category:gene == Gene SJ18388 == * transcription-direction: ** positive * right-end-position: ** 245371 * left-end-position: ** 235866 * centisome-position: ** 95.4274...")
(Created page with "Category:gene == Gene SJ11348 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18388 ==
+
== Gene SJ11348 ==
−
* transcription-direction:
 
−
** positive
 
−
* right-end-position:
 
−
** 245371
 
−
* left-end-position:
 
−
** 235866
 
−
* centisome-position:
 
−
** 95.4274   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[GPPSYN-RXN]]
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* [[1.14.13.78-RXN]]
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** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-11488]]
 
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** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-11963]]
 
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** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8999]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-1121]]
−
* [[RXN-9969]]
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** Category: [[orthology]]
−
** Category: [[annotation]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-12510]]
−
* [[RXN0-5180]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-3661]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-5242]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7580]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7651]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5047]]
−
* [[PWY-6383]]
+
** '''6''' reactions found over '''15''' reactions in the full pathway
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-5034]]
−
* [[PWY-7410]]
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-2181]]
−
* [[PWY-7102]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6859]]
 
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7736]]
+
* [[PWY-3101]]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5122]]
+
* [[PWY-5640]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7141]]
+
* [[PWY-5060]]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY1F-467]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7659]]
+
* [[PWY-1121]]
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''9''' reactions found over '''20''' reactions in the full pathway
−
* [[PWY-7709]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5123]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7182]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5785]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6129]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5815]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=245371}}
 
−
{{#set: left-end-position=235866}}
 
−
{{#set: centisome-position=95.4274    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=8}}

Latest revision as of 11:04, 18 March 2021

Gene SJ11348

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5047
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-5034
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-2181
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3101
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5640
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5060
    • 1 reactions found over 6 reactions in the full pathway
  • PWY1F-467
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-1121
    • 9 reactions found over 20 reactions in the full pathway


Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11348&oldid=133278"