Difference between revisions of "SJ11348"

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(Created page with "Category:gene == Gene SJ02034 == * transcription-direction: ** negative * right-end-position: ** 426445 * left-end-position: ** 422029 * centisome-position: ** 77.27232...")
(Created page with "Category:gene == Gene SJ11348 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02034 ==
+
== Gene SJ11348 ==
−
* transcription-direction:
 
−
** negative
 
−
* right-end-position:
 
−
** 426445
 
−
* left-end-position:
 
−
** 422029
 
−
* centisome-position:
 
−
** 77.27232   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[ATCY]]
+
* [[1.14.13.78-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[AUPT]]
+
* [[RXN-1121]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[DATCY]]
+
* [[RXN-12510]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[DATUP]]
+
* [[RXN-3661]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[DCTCP]]
+
* [[RXN-5242]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[DCTUP]]
+
* [[RXN-7580]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[DGTCY]]
+
* [[RXN-7651]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[DGTUP]]
+
* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[DTTGY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DTTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DUTCP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DUTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GTCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ITCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ITUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[URACIL-PRIBOSYLTRANS-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[URIDINEKIN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[URKI-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[UTCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[UTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7183]]
+
* [[PWY-5047]]
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5034]]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-2181]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3101]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5640]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7193]]
+
* [[PWY-5060]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY1F-467]]
−
{{#set: right-end-position=426445}}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: left-end-position=422029}}
+
* [[PWY-1121]]
−
{{#set: centisome-position=77.27232    }}
+
** '''9''' reactions found over '''20''' reactions in the full pathway
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=21}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=8}}

Latest revision as of 11:04, 18 March 2021

Gene SJ11348

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5047
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-5034
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-2181
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3101
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5640
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5060
    • 1 reactions found over 6 reactions in the full pathway
  • PWY1F-467
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-1121
    • 9 reactions found over 20 reactions in the full pathway


Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11348&oldid=133278"