Difference between revisions of "SJ11349"

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(Created page with "Category:gene == Gene SJ15115 == * transcription-direction: ** positive * right-end-position: ** 20483 * left-end-position: ** 5323 * centisome-position: ** 1.7681447...")
(Created page with "Category:gene == Gene SJ11349 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
 
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[[Category:gene]]
 
[[Category:gene]]
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== Gene SJ15115 ==
+
== Gene SJ11349 ==
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* transcription-direction:
 
−
** positive
 
−
* right-end-position:
 
−
** 20483
 
−
* left-end-position:
 
−
** 5323
 
−
* centisome-position:
 
−
** 1.7681447   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
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* [[ADP-DEAMINASE-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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** Category: [[annotation]]
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* [[1.14.13.78-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[AMP-DEAMINASE-RXN]]
 
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** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[ATP-DEAMINASE-RXN]]
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* [[RXN-1121]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12510]]
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** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-3661]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-5242]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7580]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7651]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6596]]
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* [[PWY-5047]]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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** '''6''' reactions found over '''15''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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* [[PWY-5034]]
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{{#set: right-end-position=20483}}
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** '''6''' reactions found over '''6''' reactions in the full pathway
−
{{#set: left-end-position=5323}}
+
* [[PWY-2181]]
−
{{#set: centisome-position=1.7681447    }}
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3101]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5640]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5060]]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY1F-467]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-1121]]
 +
** '''9''' reactions found over '''20''' reactions in the full pathway
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=8}}

Latest revision as of 11:09, 18 March 2021

Gene SJ11349

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5047
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-5034
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-2181
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3101
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5640
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5060
    • 1 reactions found over 6 reactions in the full pathway
  • PWY1F-467
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-1121
    • 9 reactions found over 20 reactions in the full pathway


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