Difference between revisions of "SJ11447"
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(Created page with "Category:gene == Gene SJ15189 == * transcription-direction: ** negative * right-end-position: ** 512208 * left-end-position: ** 509305 * centisome-position: ** 71.99217...") |
(Created page with "Category:gene == Gene SJ14150 == * transcription-direction: ** positive * right-end-position: ** 239295 * left-end-position: ** 216979 * centisome-position: ** 30.20061...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ14150 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 239295 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 216979 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 30.20061 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[MALSYN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[P105-PWY]] |
| − | ** '''7''' reactions found over ''' | + | ** '''10''' reactions found over '''11''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-6969]] |
| − | {{#set: right-end-position= | + | ** '''10''' reactions found over '''12''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[GLYOXYLATE-BYPASS]] |
| − | {{#set: centisome-position= | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
| + | * [[PWY-7294]] | ||
| + | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-7295]] | ||
| + | ** '''1''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-7854]] | ||
| + | ** '''1''' reactions found over '''14''' reactions in the full pathway | ||
| + | * [[PWY-7118]] | ||
| + | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[GLYOXDEG-PWY]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=239295}} | ||
| + | {{#set: left-end-position=216979}} | ||
| + | {{#set: centisome-position=30.20061 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=8}} |
Revision as of 13:07, 14 January 2021
Contents
Gene SJ14150
- transcription-direction:
- positive
- right-end-position:
- 239295
- left-end-position:
- 216979
- centisome-position:
- 30.20061
Organism(s) associated with this gene
Reaction(s) associated
- MALSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- P105-PWY
- 10 reactions found over 11 reactions in the full pathway
- PWY-6969
- 10 reactions found over 12 reactions in the full pathway
- GLYOXYLATE-BYPASS
- 6 reactions found over 6 reactions in the full pathway
- PWY-7294
- 1 reactions found over 7 reactions in the full pathway
- PWY-7295
- 1 reactions found over 8 reactions in the full pathway
- PWY-7854
- 1 reactions found over 14 reactions in the full pathway
- PWY-7118
- 5 reactions found over 6 reactions in the full pathway
- GLYOXDEG-PWY
- 2 reactions found over 2 reactions in the full pathway
