Difference between revisions of "SJ11479"

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(Created page with "Category:gene == Gene SJ00834 == * transcription-direction: ** positive * right-end-position: ** 537681 * left-end-position: ** 535749 * centisome-position: ** 95.86016...")
(Created page with "Category:gene == Gene SJ10371 == * transcription-direction: ** negative * right-end-position: ** 49889 * left-end-position: ** 30389 * centisome-position: ** 3.7562172...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00834 ==
+
== Gene SJ10371 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 537681
+
** 49889
 
* left-end-position:
 
* left-end-position:
−
** 535749
+
** 30389
 
* centisome-position:
 
* centisome-position:
−
** 95.86016    
+
** 3.7562172    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
−
* [[1.14.21.6-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-11887]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13883]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13892]]
+
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-16378]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-4209]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN3O-218]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY66-341]]
+
* [[PWY-6545]]
−
** '''14''' reactions found over '''18''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY66-3]]
+
* [[PWY-7210]]
−
** '''12''' reactions found over '''18''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY66-4]]
+
* [[PWY-7198]]
−
** '''14''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7154]]
+
* [[PWY-7184]]
−
** '''2''' reactions found over '''11''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7155]]
+
{{#set: transcription-direction=negative}}
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=49889}}
−
* [[PWY-2541]]
+
{{#set: left-end-position=30389}}
−
** '''11''' reactions found over '''35''' reactions in the full pathway
+
{{#set: centisome-position=3.7562172   }}
−
* [[PWY-6075]]
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
{{#set: nb reaction associated=5}}
−
{{#set: transcription-direction=positive}}
+
{{#set: nb pathway associated=4}}
−
{{#set: right-end-position=537681}}
 
−
{{#set: left-end-position=535749}}
 
−
{{#set: centisome-position=95.86016   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=7}}
 
−
{{#set: nb pathway associated=7}}
 

Revision as of 20:23, 18 December 2020

Gene SJ10371

  • transcription-direction:
    • negative
  • right-end-position:
    • 49889
  • left-end-position:
    • 30389
  • centisome-position:
    • 3.7562172

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11479&oldid=42647"