Difference between revisions of "SJ11485"

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(Created page with "Category:gene == Gene SJ20807 == * transcription-direction: ** negative * right-end-position: ** 119244 * left-end-position: ** 114219 * centisome-position: ** 56.18304...")
 
(Created page with "Category:gene == Gene SJ09862 == * transcription-direction: ** positive * right-end-position: ** 116427 * left-end-position: ** 82303 * centisome-position: ** 20.336039...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ20807 ==
+
== Gene SJ09862 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 119244
+
** 116427
 
* left-end-position:
 
* left-end-position:
** 114219
+
** 82303
 
* centisome-position:
 
* centisome-position:
** 56.18304    
+
** 20.336039    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[RXN-14249]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[F16BDEPHOS-RXN]]
+
* [[THREODEHYD-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[SUGAR-PHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[P185-PWY]]
+
* [[PWY-7378]]
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
* [[PWY66-399]]
+
* [[THRDLCTCAT-PWY]]
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
* [[SUCSYN-PWY]]
+
* [[THREONINE-DEG2-PWY]]
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
* [[CALVIN-PWY]]
+
{{#set: transcription-direction=positive}}
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: right-end-position=116427}}
* [[GLUCONEO-PWY]]
+
{{#set: left-end-position=82303}}
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: centisome-position=20.336039   }}
* [[PWY-5484]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[GLYCOLYSIS]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=119244}}
 
{{#set: left-end-position=114219}}
 
{{#set: centisome-position=56.18304   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=3}}

Revision as of 14:21, 26 August 2019

Gene SJ09862

  • transcription-direction:
    • positive
  • right-end-position:
    • 116427
  • left-end-position:
    • 82303
  • centisome-position:
    • 20.336039

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7378
    • 1 reactions found over 4 reactions in the full pathway
  • THRDLCTCAT-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • THREONINE-DEG2-PWY
    • 2 reactions found over 2 reactions in the full pathway