Difference between revisions of "SJ11565"

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(Created page with "Category:gene == Gene SJ04783 == * transcription-direction: ** negative * right-end-position: ** 241368 * left-end-position: ** 222986 * centisome-position: ** 44.12803...")
(Created page with "Category:gene == Gene SJ11565 == * transcription-direction: ** positive * right-end-position: ** 296026 * left-end-position: ** 281776 * centisome-position: ** 76.050026...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04783 ==
+
== Gene SJ11565 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 241368
+
** 296026
 
* left-end-position:
 
* left-end-position:
−
** 222986
+
** 281776
 
* centisome-position:
 
* centisome-position:
−
** 44.12803    
+
** 76.050026    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.3.56-RXN]]
−
* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ATPSYN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[PHOSPHATIDYLINOSITOL-BISPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[RXN-10036]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-8730]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7219]]
+
* [[PWY-6363]]
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-6368]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY-6362]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6364]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7184]]
+
{{#set: transcription-direction=positive}}
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=296026}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=281776}}
−
{{#set: right-end-position=241368}}
+
{{#set: centisome-position=76.050026   }}
−
{{#set: left-end-position=222986}}
 
−
{{#set: centisome-position=44.12803   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:03, 18 March 2021

Gene SJ11565

  • transcription-direction:
    • positive
  • right-end-position:
    • 296026
  • left-end-position:
    • 281776
  • centisome-position:
    • 76.050026

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6363
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6368
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6362
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6364
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11565&oldid=132828"