Difference between revisions of "SJ11615"

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(Created page with "Category:gene == Gene SJ16279 == * transcription-direction: ** positive * right-end-position: ** 5692 * left-end-position: ** 145 * centisome-position: ** 2.5283349 ==...")
(Created page with "Category:gene == Gene SJ21660 == * transcription-direction: ** positive * right-end-position: ** 227030 * left-end-position: ** 213067 * centisome-position: ** 18.835367...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16279 ==
+
== Gene SJ21660 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 5692
+
** 227030
 
* left-end-position:
 
* left-end-position:
−
** 145
+
** 213067
 
* centisome-position:
 
* centisome-position:
−
** 2.5283349    
+
** 18.835367    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[AICARTRANSFORM-RXN]]
−
* [[6.3.5.7-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[AMIDASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[FPAIF]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[IMPCYCLOHYDROLASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GUANIDINOBUTANAMIDE-NH3-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[PYRAZIN-RXN]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[R311-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14727]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14728]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17608]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXNN-404]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5921]]
+
* [[PWY-6123]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[ARGDEG-V-PWY]]
+
* [[PWY-6124]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7308]]
+
* [[PWY-7234]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5025]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-3161]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-581]]
 
−
** '''5''' reactions found over '''12''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=5692}}
+
{{#set: right-end-position=227030}}
−
{{#set: left-end-position=145}}
+
{{#set: left-end-position=213067}}
−
{{#set: centisome-position=2.5283349   }}
+
{{#set: centisome-position=18.835367   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=3}}

Revision as of 15:18, 5 January 2021

Gene SJ21660

  • transcription-direction:
    • positive
  • right-end-position:
    • 227030
  • left-end-position:
    • 213067
  • centisome-position:
    • 18.835367

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6123
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6124
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7234
    • 3 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11615&oldid=68279"