Difference between revisions of "SJ11647"

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(Created page with "Category:gene == Gene SJ17783 == * transcription-direction: ** negative * right-end-position: ** 253826 * left-end-position: ** 236141 * centisome-position: ** 92.31722...")
(Created page with "Category:gene == Gene SJ11647 == * transcription-direction: ** positive * right-end-position: ** 576070 * left-end-position: ** 565569 * centisome-position: ** 72.56700...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17783 ==
+
== Gene SJ11647 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 253826
+
** 576070
 
* left-end-position:
 
* left-end-position:
−
** 236141
+
** 565569
 
* centisome-position:
 
* centisome-position:
−
** 92.31722    
+
** 72.56700    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[CARBODEHYDRAT-RXN]]
+
* [[ARGININE--TRNA-LIGASE-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5224]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 24: Line 18:
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6142]]
+
* [[TRNA-CHARGING-PWY]]
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[PWYQT-4429]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: right-end-position=576070}}
−
* [[CYANCAT-PWY]]
+
{{#set: left-end-position=565569}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=72.56700   }}
−
* [[PWY-5744]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
{{#set: nb reaction associated=1}}
−
* [[PWY-5789]]
+
{{#set: nb pathway associated=1}}
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5743]]
 
−
** '''5''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-241]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7115]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7117]]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=253826}}
 
−
{{#set: left-end-position=236141}}
 
−
{{#set: centisome-position=92.31722   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=2}}
 
−
{{#set: nb pathway associated=9}}
 

Latest revision as of 11:08, 18 March 2021

Gene SJ11647

  • transcription-direction:
    • positive
  • right-end-position:
    • 576070
  • left-end-position:
    • 565569
  • centisome-position:
    • 72.56700

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11647&oldid=135496"