Difference between revisions of "SJ11647"

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(Created page with "Category:gene == Gene SJ17783 == * transcription-direction: ** negative * right-end-position: ** 253826 * left-end-position: ** 236141 * centisome-position: ** 92.31722...")
(Created page with "Category:gene == Gene SJ00206 == * transcription-direction: ** positive * right-end-position: ** 315571 * left-end-position: ** 314684 * centisome-position: ** 55.23621...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ17783 ==
+
== Gene SJ00206 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 253826
+
** 315571
 
* left-end-position:
 
* left-end-position:
** 236141
+
** 314684
 
* centisome-position:
 
* centisome-position:
** 92.31722    
+
** 55.23621    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[CARBODEHYDRAT-RXN]]
+
* [[FADSYN-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN0-5224]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 24: Line 18:
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-6142]]
+
* [[PWY66-366]]
** '''10''' reactions found over '''13''' reactions in the full pathway
 
* [[PWYQT-4429]]
 
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
* [[CYANCAT-PWY]]
+
* [[RIBOSYN2-PWY]]
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
* [[PWY-5744]]
+
* [[PWY-6167]]
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''5''' reactions found over '''10''' reactions in the full pathway
* [[PWY-5789]]
+
* [[PWY-6168]]
** '''8''' reactions found over '''18''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
* [[PWY-5743]]
+
{{#set: transcription-direction=positive}}
** '''5''' reactions found over '''13''' reactions in the full pathway
+
{{#set: right-end-position=315571}}
* [[PWY-241]]
+
{{#set: left-end-position=314684}}
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: centisome-position=55.23621   }}
* [[PWY-7115]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
** '''9''' reactions found over '''10''' reactions in the full pathway
+
{{#set: nb reaction associated=1}}
* [[PWY-7117]]
+
{{#set: nb pathway associated=4}}
** '''10''' reactions found over '''12''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=253826}}
 
{{#set: left-end-position=236141}}
 
{{#set: centisome-position=92.31722   }}
 
{{#set: organism associated=S.japonica_sterols_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=9}}
 

Revision as of 14:51, 5 January 2021

Gene SJ00206

  • transcription-direction:
    • positive
  • right-end-position:
    • 315571
  • left-end-position:
    • 314684
  • centisome-position:
    • 55.23621

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-366
    • 2 reactions found over 2 reactions in the full pathway
  • RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6167
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6168
    • 7 reactions found over 9 reactions in the full pathway