Difference between revisions of "SJ11730"
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(Created page with "Category:gene == Gene SJ06042 == * transcription-direction: ** negative * right-end-position: ** 224267 * left-end-position: ** 206792 * centisome-position: ** 42.841045...") |
(Created page with "Category:gene == Gene SJ11730 == * transcription-direction: ** positive * right-end-position: ** 231046 * left-end-position: ** 220633 * centisome-position: ** 59.803165...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ11730 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 231046 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 220633 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 59.803165 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[2. | + | * [[2.4.1.151-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[2.4.1.46-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
| − | {{#set: right-end-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: left-end-position= | + | * [[RXN-16027]] |
| − | {{#set: centisome-position= | + | ** Category: [[annotation]] |
| − | {{#set: organism associated=S. | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: nb reaction associated=2}} | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7434]] | ||
| + | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-401]] | ||
| + | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=231046}} | ||
| + | {{#set: left-end-position=220633}} | ||
| + | {{#set: centisome-position=59.803165 }} | ||
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| + | {{#set: nb reaction associated=3}} | ||
| + | {{#set: nb pathway associated=2}} | ||
Latest revision as of 11:03, 18 March 2021
Contents
Gene SJ11730
- transcription-direction:
- positive
- right-end-position:
- 231046
- left-end-position:
- 220633
- centisome-position:
- 59.803165
Organism(s) associated with this gene
Reaction(s) associated
- 2.4.1.151-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 2.4.1.46-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-16027
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7434
- 5 reactions found over 8 reactions in the full pathway
- PWY-401
- 2 reactions found over 5 reactions in the full pathway
