Difference between revisions of "SJ11752"

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(Created page with "Category:gene == Gene SJ08595 == * transcription-direction: ** negative * right-end-position: ** 585214 * left-end-position: ** 576884 * centisome-position: ** 67.17139...")
(Created page with "Category:gene == Gene SJ15901 == * transcription-direction: ** positive * right-end-position: ** 271599 * left-end-position: ** 262724 * centisome-position: ** 90.4993...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08595 ==
+
== Gene SJ15901 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 585214
+
** 271599
 
* left-end-position:
 
* left-end-position:
−
** 576884
+
** 262724
 
* centisome-position:
 
* centisome-position:
−
** 67.17139    
+
** 90.4993    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.6.3.1-RXN]]
−
* [[RXN-11370]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ATPASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11373]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11374]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12195]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14326]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12196]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[RXN-15775]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6482]]
+
* [[PWY-7210]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7546]]
+
* [[PWY-7198]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7184]]
−
{{#set: right-end-position=585214}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=576884}}
+
* [[PWY-6545]]
−
{{#set: centisome-position=67.17139   }}
+
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=271599}}
 +
{{#set: left-end-position=262724}}
 +
{{#set: centisome-position=90.4993   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}

Revision as of 11:05, 15 January 2021

Gene SJ15901

  • transcription-direction:
    • positive
  • right-end-position:
    • 271599
  • left-end-position:
    • 262724
  • centisome-position:
    • 90.4993

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11752&oldid=107003"