Difference between revisions of "SJ11757"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-uridine-38-40 tRNA-uridine-38-40] == * common-name: ** a uridine38-40 in trna == Reaction(...")
(Created page with "Category:gene == Gene SJ21972 == * transcription-direction: ** positive * right-end-position: ** 248261 * left-end-position: ** 242033 * centisome-position: ** 41.227844...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-uridine-38-40 tRNA-uridine-38-40] ==
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== Gene SJ21972 ==
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* common-name:
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* transcription-direction:
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** a uridine38-40 in trna
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** positive
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== Reaction(s) known to consume the compound ==
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* right-end-position:
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** 248261
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== Reaction(s) known to produce the compound ==
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* left-end-position:
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== Reaction(s) of unknown directionality ==
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** 242033
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{{#set: common-name=a uridine38-40 in trna}}
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* centisome-position:
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** 41.227844   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_sterols_curated]]
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== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[1.1.1.145-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[DIHYDROKAEMPFEROL-4-REDUCTASE-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-1101]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-1106]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-1124]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-12693]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12747]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12789]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-600]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-7784]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-9725]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[RXN66-342]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-350]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-353]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY1F-823]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-361]]
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** '''7''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-6027]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6946]]
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** '''6''' reactions found over '''22''' reactions in the full pathway
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* [[PWY-6944]]
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** '''2''' reactions found over '''25''' reactions in the full pathway
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* [[PWY-6948]]
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** '''2''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-5152]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6035]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY66-378]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7299]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=248261}}
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{{#set: left-end-position=242033}}
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{{#set: centisome-position=41.227844    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=14}}
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{{#set: nb pathway associated=10}}

Revision as of 20:22, 18 December 2020

Gene SJ21972

  • transcription-direction:
    • positive
  • right-end-position:
    • 248261
  • left-end-position:
    • 242033
  • centisome-position:
    • 41.227844

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-361
    • 7 reactions found over 15 reactions in the full pathway
  • PWY-6027
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-6948
    • 2 reactions found over 18 reactions in the full pathway
  • PWY-5152
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6035
    • 1 reactions found over 3 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7299
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11757&oldid=42217"