Difference between revisions of "SJ11815"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-HYDROXYINDOLE_ACETALDEHYDE 5-HYDROXYINDOLE_ACETALDEHYDE] == * common-name: ** 5-hydroxyindole...")
 
(Created page with "Category:gene == Gene SJ11815 == * transcription-direction: ** negative * right-end-position: ** 318368 * left-end-position: ** 310584 * centisome-position: ** 84.72521...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-HYDROXYINDOLE_ACETALDEHYDE 5-HYDROXYINDOLE_ACETALDEHYDE] ==
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== Gene SJ11815 ==
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* common-name:
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* transcription-direction:
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** 5-hydroxyindole acetaldehyde
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** negative
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* smiles:
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* right-end-position:
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** c1(nc2(c(c(cc=o)=1)=cc(=cc=2)o))
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** 318368
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* inchi-key:
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* left-end-position:
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** obfapciusyhfie-uhfffaoysa-n
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** 310584
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* molecular-weight:
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* centisome-position:
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** 175.187
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** 84.72521   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-10780]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-10781]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[6PGLUCONDEHYDROG-RXN]]
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* [[RXN-10778]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=5-hydroxyindole acetaldehyde}}
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* [[PYRROLINECARBREDUCT-RXN]]
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{{#set: inchi-key=inchikey=obfapciusyhfie-uhfffaoysa-n}}
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** Category: [[annotation]]
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{{#set: molecular-weight=175.187}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-9952]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-546]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[P122-PWY]]
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** '''16''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-3341]]
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** '''4''' reactions found over '''3''' reactions in the full pathway
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* [[PROSYN-PWY]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6344]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-4981]]
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** '''3''' reactions found over '''2''' reactions in the full pathway
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* [[ARG-PRO-PWY]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[OXIDATIVEPENT-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=318368}}
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{{#set: left-end-position=310584}}
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{{#set: centisome-position=84.72521    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=7}}

Latest revision as of 11:03, 18 March 2021

Gene SJ11815

  • transcription-direction:
    • negative
  • right-end-position:
    • 318368
  • left-end-position:
    • 310584
  • centisome-position:
    • 84.72521

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-3341
    • 4 reactions found over 3 reactions in the full pathway
  • PROSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6344
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-4981
    • 3 reactions found over 2 reactions in the full pathway
  • ARG-PRO-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway




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