Difference between revisions of "SJ11815"

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(Created page with "Category:gene == Gene SJ06433 == * transcription-direction: ** negative * right-end-position: ** 35969 * left-end-position: ** 27709 * centisome-position: ** 34.82255...")
(Created page with "Category:gene == Gene SJ11815 == * transcription-direction: ** negative * right-end-position: ** 318368 * left-end-position: ** 310584 * centisome-position: ** 84.72521...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06433 ==
+
== Gene SJ11815 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 35969
+
** 318368
 
* left-end-position:
 
* left-end-position:
−
** 27709
+
** 310584
 
* centisome-position:
 
* centisome-position:
−
** 34.82255    
+
** 84.72521    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ASPARTATEKIN-RXN]]
+
* [[6PGLUCONDEHYDROG-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PYRROLINECARBREDUCT-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[GLUTKIN-RXN]]
+
* [[RXN-9952]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN66-546]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10068]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12002]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[P122-PWY]]
−
* [[PWY-5097]]
+
** '''16''' reactions found over '''18''' reactions in the full pathway
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6559]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P101-PWY]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[DAPLYSINESYN-PWY]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2941]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2942]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6562]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7153]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[HOMOSERSYN-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6922]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[ARGININE-SYN4-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
* [[PWY-3341]]
 
* [[PWY-3341]]
 
** '''4''' reactions found over '''3''' reactions in the full pathway
 
** '''4''' reactions found over '''3''' reactions in the full pathway
 
* [[PROSYN-PWY]]
 
* [[PROSYN-PWY]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[CITRULBIO-PWY]]
+
* [[PWY-6344]]
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7524]]
+
* [[PWY-4981]]
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6174]]
+
* [[ARG-PRO-PWY]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7176]]
+
* [[OXIDATIVEPENT-PWY]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=35969}}
+
{{#set: right-end-position=318368}}
−
{{#set: left-end-position=27709}}
+
{{#set: left-end-position=310584}}
−
{{#set: centisome-position=34.82255   }}
+
{{#set: centisome-position=84.72521   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=4}}
 
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=17}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:03, 18 March 2021

Gene SJ11815

  • transcription-direction:
    • negative
  • right-end-position:
    • 318368
  • left-end-position:
    • 310584
  • centisome-position:
    • 84.72521

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-3341
    • 4 reactions found over 3 reactions in the full pathway
  • PROSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6344
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-4981
    • 3 reactions found over 2 reactions in the full pathway
  • ARG-PRO-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11815&oldid=132858"