Difference between revisions of "SJ12004"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-650 CPD-650] == * common-name: ** (3r)-3-hydroxybutanoyl-coa * smiles: ** cc(cc(sccnc(=o)cc...")
(Created page with "Category:gene == Gene SJ05741 == * transcription-direction: ** negative * right-end-position: ** 113957 * left-end-position: ** 100900 * centisome-position: ** 20.61603...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-650 CPD-650] ==
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== Gene SJ05741 ==
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* common-name:
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* transcription-direction:
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** (3r)-3-hydroxybutanoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** cc(cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o)o
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** 113957
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* inchi-key:
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* left-end-position:
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** qhhkkmyhdbrony-wzzmxtmrsa-j
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** 100900
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* molecular-weight:
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* centisome-position:
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** 849.593
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** 20.61603   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_sterols_curated]]
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* [[RXN-5901]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=(3r)-3-hydroxybutanoyl-coa}}
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* [[3.2.1.21-RXN]]
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{{#set: inchi-key=inchikey=qhhkkmyhdbrony-wzzmxtmrsa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=849.593}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[3.2.1.58-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-10769]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10773]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13602]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13603]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14179]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-5341]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8036]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9674]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6788]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7091]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7092]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-3121]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5176]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6002]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=113957}}
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{{#set: left-end-position=100900}}
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{{#set: centisome-position=20.61603    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=10}}
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{{#set: nb pathway associated=6}}

Revision as of 20:20, 18 December 2020

Gene SJ05741

  • transcription-direction:
    • negative
  • right-end-position:
    • 113957
  • left-end-position:
    • 100900
  • centisome-position:
    • 20.61603

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6788
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7091
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7092
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3121
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5176
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6002
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12004&oldid=41107"