Difference between revisions of "SJ12005"

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(Created page with "Category:gene == Gene SJ06433 == * transcription-direction: ** negative * right-end-position: ** 35969 * left-end-position: ** 27709 * centisome-position: ** 34.82255...")
(Created page with "Category:gene == Gene SJ11677 == * transcription-direction: ** positive * right-end-position: ** 209773 * left-end-position: ** 201052 * centisome-position: ** 54.351746...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06433 ==
+
== Gene SJ11677 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 35969
+
** 209773
 
* left-end-position:
 
* left-end-position:
−
** 27709
+
** 201052
 
* centisome-position:
 
* centisome-position:
−
** 34.82255    
+
** 54.351746    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ASPARTATEKIN-RXN]]
+
* [[RXN-11836]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUTKIN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10068]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12002]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[orthology]]
+
{{#set: right-end-position=209773}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=201052}}
−
== Pathway(s) associated ==
+
{{#set: centisome-position=54.351746   }}
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-5097]]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6559]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P101-PWY]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[DAPLYSINESYN-PWY]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2941]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2942]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6562]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7153]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[HOMOSERSYN-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6922]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[ARGININE-SYN4-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-3341]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PROSYN-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7524]]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6174]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7176]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=35969}}
 
−
{{#set: left-end-position=27709}}
 
−
{{#set: centisome-position=34.82255   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=17}}
 

Revision as of 09:27, 27 August 2019

Gene SJ11677

  • transcription-direction:
    • positive
  • right-end-position:
    • 209773
  • left-end-position:
    • 201052
  • centisome-position:
    • 54.351746

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12005&oldid=32284"