Difference between revisions of "SJ12042"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ12222 == * transcription-direction: ** positive * right-end-position: ** 678221 * left-end-position: ** 672326 * centisome-position: ** 87.89748...")
(Created page with "Category:gene == Gene SJ10869 == * transcription-direction: ** negative * right-end-position: ** 225424 * left-end-position: ** 203752 * centisome-position: ** 53.30975...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ12222 ==
+
== Gene SJ10869 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 678221
+
** 225424
 
* left-end-position:
 
* left-end-position:
** 672326
+
** 203752
 
* centisome-position:
 
* centisome-position:
** 87.89748    
+
** 53.30975    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.4.17.19-RXN]]
* [[3.1.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[CARBOXYLESTERASE-RXN]]
+
{{#set: transcription-direction=negative}}
** Category: [[annotation]]
+
{{#set: right-end-position=225424}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=203752}}
* [[LEUCINE--TRNA-LIGASE-RXN]]
+
{{#set: centisome-position=53.30975   }}
** Category: [[annotation]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: nb reaction associated=1}}
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10711]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10767]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12252]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12575]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXNQT-4366]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
* [[TRNA-CHARGING-PWY]]
 
** '''21''' reactions found over '''21''' reactions in the full pathway
 
* [[PWY-6303]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6857]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=678221}}
 
{{#set: left-end-position=672326}}
 
{{#set: centisome-position=87.89748   }}
 
{{#set: organism associated=S.japonica_sterols_curated}}
 
{{#set: nb reaction associated=9}}
 
{{#set: nb pathway associated=3}}
 

Revision as of 14:47, 5 January 2021

Gene SJ10869

  • transcription-direction:
    • negative
  • right-end-position:
    • 225424
  • left-end-position:
    • 203752
  • centisome-position:
    • 53.30975

Organism(s) associated with this gene

Reaction(s) associated