Difference between revisions of "SJ12054"

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(Created page with "Category:gene == Gene SJ16901 == * transcription-direction: ** negative * right-end-position: ** 128364 * left-end-position: ** 110101 * centisome-position: ** 39.93638...")
(Created page with "Category:gene == Gene SJ19508 == * transcription-direction: ** negative * right-end-position: ** 157396 * left-end-position: ** 126917 * centisome-position: ** 56.237095...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16901 ==
+
== Gene SJ19508 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 128364
+
** 157396
 
* left-end-position:
 
* left-end-position:
−
** 110101
+
** 126917
 
* centisome-position:
 
* centisome-position:
−
** 39.93638    
+
** 56.237095    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
−
* [[4-COUMARATE--COA-LIGASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[6.2.1.34-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ACETATE--COA-LIGASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[BUTYRATE--COA-LIGASE-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10919]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-1126]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-2001]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7210]]
−
* [[PWY-7397]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[PWY-6320]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[PWY-6435]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-6545]]
−
* [[PWY1F-FLAVSYN]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-361]]
 
−
** '''7''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5135]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7398]]
 
−
** '''3''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7046]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7897]]
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5754]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6920]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6982]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6343]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-1121]]
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY66-161]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7118]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY66-162]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY0-1313]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6672]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY66-21]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7007]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6673]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6457]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=128364}}
+
{{#set: right-end-position=157396}}
−
{{#set: left-end-position=110101}}
+
{{#set: left-end-position=126917}}
−
{{#set: centisome-position=39.93638   }}
+
{{#set: centisome-position=56.237095   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=23}}
+
{{#set: nb pathway associated=4}}

Revision as of 18:45, 14 January 2021

Gene SJ19508

  • transcription-direction:
    • negative
  • right-end-position:
    • 157396
  • left-end-position:
    • 126917
  • centisome-position:
    • 56.237095

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12054&oldid=94097"