Difference between revisions of "SJ12057"

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(Created page with "Category:gene == Gene SJ07216 == * transcription-direction: ** negative * right-end-position: ** 934053 * left-end-position: ** 926385 * centisome-position: ** 63.404297...")
(Created page with "Category:gene == Gene SJ00560 == * transcription-direction: ** positive * right-end-position: ** 120184 * left-end-position: ** 119744 * centisome-position: ** 72.38567...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07216 ==
+
== Gene SJ00560 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 934053
+
** 120184
 
* left-end-position:
 
* left-end-position:
−
** 926385
+
** 119744
 
* centisome-position:
 
* centisome-position:
−
** 63.404297    
+
** 72.38567    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETYLORNTRANSAM-RXN]]
+
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=positive}}
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=120184}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=119744}}
−
* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
+
{{#set: centisome-position=72.38567   }}
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15007]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[SUCCINYLDIAMINOPIMTRANS-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[GLUTORN-PWY]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[ARGSYNBSUB-PWY]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5154]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[GLYSYN-ALA-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7400]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[DAPLYSINESYN-PWY]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=934053}}
 
−
{{#set: left-end-position=926385}}
 
−
{{#set: centisome-position=63.404297   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=6}}
 

Revision as of 08:17, 15 March 2021

Gene SJ00560

  • transcription-direction:
    • positive
  • right-end-position:
    • 120184
  • left-end-position:
    • 119744
  • centisome-position:
    • 72.38567

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12057&oldid=120611"