Difference between revisions of "SJ12057"

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(Created page with "Category:gene == Gene SJ07216 == * transcription-direction: ** negative * right-end-position: ** 934053 * left-end-position: ** 926385 * centisome-position: ** 63.404297...")
(Created page with "Category:gene == Gene SJ12057 == * transcription-direction: ** negative * right-end-position: ** 79969 * left-end-position: ** 64333 * centisome-position: ** 17.763107...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07216 ==
+
== Gene SJ12057 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 934053
+
** 79969
 
* left-end-position:
 
* left-end-position:
−
** 926385
+
** 64333
 
* centisome-position:
 
* centisome-position:
−
** 63.404297    
+
** 17.763107    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETYLORNTRANSAM-RXN]]
+
* [[DIACYLGLYKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12959]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15007]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-15091]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[SUCCINYLDIAMINOPIMTRANS-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[GLUTORN-PWY]]
+
* [[PWY-7039]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[ARGSYNBSUB-PWY]]
+
* [[PWY-7817]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-5154]]
+
* [[TRIGLSYN-PWY]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[GLYSYN-ALA-PWY]]
+
* [[PWY-7420]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7400]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[DAPLYSINESYN-PWY]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=934053}}
+
{{#set: right-end-position=79969}}
−
{{#set: left-end-position=926385}}
+
{{#set: left-end-position=64333}}
−
{{#set: centisome-position=63.404297   }}
+
{{#set: centisome-position=17.763107   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ12057

  • transcription-direction:
    • negative
  • right-end-position:
    • 79969
  • left-end-position:
    • 64333
  • centisome-position:
    • 17.763107

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7817
    • 6 reactions found over 16 reactions in the full pathway
  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7420
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12057&oldid=133627"