Difference between revisions of "SJ12116"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-2742 CPD-2742] == * common-name: ** cotinine * smiles: ** c1(=o)(cc[ch](n(c)1)c2(c=nc=cc=2)...")
(Created page with "Category:gene == Gene SJ12116 == * transcription-direction: ** positive * right-end-position: ** 99286 * left-end-position: ** 83347 * centisome-position: ** 23.01831...")
 
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-2742 CPD-2742] ==
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== Gene SJ12116 ==
* common-name:
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* transcription-direction:
** cotinine
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** positive
* smiles:
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* right-end-position:
** c1(=o)(cc[ch](n(c)1)c2(c=nc=cc=2))
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** 99286
* inchi-key:
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* left-end-position:
** uikrocxwunqspj-vifpvbqesa-n
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** 83347
* molecular-weight:
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* centisome-position:
** 176.218
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** 23.01831   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[RXN66-161]]
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* [[S.japonica_carotenoid_curated]]
* [[RXN66-163]]
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== Reaction(s) associated ==
* [[RXN66-168]]
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* [[GLYCINE-N-METHYLTRANSFERASE-RXN]]
* [[RXN66-169]]
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** Category: [[annotation]]
== Reaction(s) known to produce the compound ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Reaction(s) of unknown directionality ==
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* [[RXN-13404]]
{{#set: common-name=cotinine}}
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** Category: [[annotation]]
{{#set: inchi-key=inchikey=uikrocxwunqspj-vifpvbqesa-n}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: molecular-weight=176.218}}
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* [[RXN-13405]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13406]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9679]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9680]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[P541-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6004]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
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{{#set: right-end-position=99286}}
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{{#set: left-end-position=83347}}
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{{#set: centisome-position=23.01831    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=2}}

Latest revision as of 11:01, 18 March 2021

Gene SJ12116

  • transcription-direction:
    • positive
  • right-end-position:
    • 99286
  • left-end-position:
    • 83347
  • centisome-position:
    • 23.01831

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P541-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6004
    • 3 reactions found over 3 reactions in the full pathway